View family alignment

Fasta file of sequences

Relatives


At4g08080 Link to TAIR Link to Aramemnon (562aa) 2 TMS, N-term is OUT

may be a pseudogene / similar to a family of Arabidopsis thaliana hypothetical proteins with similarity to a Vicia faba retrotransposon-like gene

MSNYIGESSMDPDYNVDEAESWSARPREQHVYQSFRDEFERSTARRNQRRAEIARGKRAMSSRYELIDEDIETEYEPESWRRE
TKLLNKSDEVTVEEYIRFFEMNDFWGTRYPCYETLAQLGLLEDVQHLFEKCHLETLMSYPYPAYKEETIEFLSTLQVEVYEAL
TDFELDTMGLGFLTFSRSVTNVFYSMESTGTVSNTDMEMIDYALTGILRRTKGKNVLRGDLNNAPPVMPLLIHLCGYRKWALT
NGKKKVRGAVCVGGVVTPILEACGVPLKEPGLAPRMMDLDHLRKCEFLEFDMAGDFHRYRFEHSSIRIANILLPCIDATRILE
GRNIDFKPALEDLYFEGSPPTEEFSHTEGATTEDVDETDDIDEAEFDTSMYHFTIPQGHLPQDMPSRRYDAPEPSRRRPEPRE
QEISHVPARHSSFEPRESGRKRRTTLTRSSSRSGRLLQSRSLRDRGAGRNRGERSSFLRAVLAATKLMRSSTHLLELIQNKAV
RLWPRSNRRQPLTSNYVHSSTEVSASPHHCIIPYVVICFFIFCFCDWICPEYSLPSLFTQWTV*





At5g32423 Link to TAIR Link to Aramemnon (524aa) 2 TMS, N-term is IN

similar to putative Athila retroelement ORF1 protein / temporary automated functional assignment

MSNYSGSSSVDPDYNMDETESSSSRPEREQREYESFRRKAEIARGKRAMTERYELIDEDLEDEYMPEQTRRATKLLHKPNILP
AEEYVRLFKLNEFCSTRYPCSTSLAQLGLLEDVQHLLSIKRLEGLFGFPSGMGSKPKYEREELKDLWITIGSSVPLNASKSKS
NQIRSPVIRYFQRSVANGEINDTPLDVLLLIHLCGYKSWAVTNNRKRARGALCVGGVVTPILIACGVPLISAGLEPRAMDIEH
LRHCEFLEFAMVDDLHRFRFEHSTDRRANILLPSHEVTRIIEGDNIDFRPEIGRLYYENAPPLDEDDLLEEAASDGMDEDRAV
KFDTSMYHFAEHVPPARQSKSLTEAHKNNSKLQKWCKKQDKLIAKCFKLLTDKLSCSSSTTAIPQVQPPMEMPSSRINAPAHR
PELSEQRVPHVQARHLSFESWEHKRRRKATLTRSSSRSRLIYSRRSLDRGTGRSRRREVEFPQSGAGRHRADEVEYPPAGADT
EQGGSSMAWEQSQAAIDEQLRSFFD*





At5g32475 Link to TAIR Link to Aramemnon (689aa) 2 TMS, N-term is OUT

Athila retroelement ORF2, putative /

MDPDYNVDEAESWSARSREQHVLQSFRDEFKRSAARRNQRRAEIARGKRAMSSRYEVINEDIETEYEPESWRRETKLLNKPDE
VTVEEYIRFFEMNDFWGTRYLCYETLAQLGLLEDVQHLFKKCHLETLMSYPYPAYKEETIEFLSTLQVEMYEALTDFELDIMG
LGFLTFLVNEQRYQLSIKKLEELFGFPSGKGTKPRFDREELKDLWATIENNLPLNLARSKSNQIRSHVICYFQRSVANVFYSR
ESTGTVFNTDIEMIDYALTGILRRTKGKNVLRGDLNNAPQVMPLLIHFCGYRKWALTNGKKKVRGALCVGGVVTPILQGCGVP
LKEPGLAPRMMDLDHLRRCEFLEFDMAGDFHRYRFDNSSIKIANILLPCIDATRILEGRNIDFKPALEELYFEGSPPTEEISH
TEGATTKDIDETDNIDEAEFDTSMYHFSEHIPPARESRSLSEAHRNNSKLQKWCMKQDKLLAKCHRAIKFMKNKLSCYSSNTA
IPQGHLPQDMPSRRYDAPEPSRRRHEPREQEIPHVPARHSSFEPRESGRKRRTTLTRSSSRSGRLLHSRSLRDRGAGRSRRRE
VEYPQSGAGRHRADEVEYPPAGADTEQGGSSLTSNYVHSSTEVSASLHHCIIPSIVICFFIFFISVIGFVLSTLFQVYSHSGL
CDLSLGEGSGSVCCIVHIFESAFI*





At4g03860 Link to TAIR Link to Aramemnon (746aa) 2 TMS, N-term is IN

putative transposon protein / similar to athila retroelement

MFKNQKILYIIYSTNKSYKVLRGVYQVYRRLRDFLSFTRPQLSSPLHHHGLLPLSKETTRPHHFIHSTSITKSPSPLLALNHS
TIFTINQSNRFLLHSSSKTGPPLHSTTTTKPASLDFTSSLDRVSFFTNHTNSPLTLSSYSTACKKKLTKQSDEPSTTLLAFAP
RSSFIMSNYNGESSMDPDYNVDEAESWSTRPKREEHVYESFKGELERSAARRNQRRAKIARGKRAMSSRYELIDEDIETEYEP
ESWRMETKLLNKPDEVTVEEYIRFFEMNDFWGTRYPCYETLAQLGLLEDVQHQFEKCHLETLMSYPYATYKEERIEFLSTLQL
SIKKLEELFGFPSGNGTKPKFERKELKDLWATSGNNVPLNSARSKSNQIRSPVIRYFQRSIANVLYSRESTGTVFNTDMEMID
SALTGILRRTKGKNVLRGNLNDAPPVMPLLIHLCGYRKWALTNGKKKEPGLAPRMMDFDHLRRCEFLEYDMVGDFHRYRFEDS
SIRIANILLPCIDANRILEGRNIDFKPALEDLYFEGSPPTEEISHTEGAIKEDVDVTVEIDEVEFDTSMYHFSEHIPPAREIK
SLSEAQKNNSKLQKWCKKLDKLLAKCLRAIKFLKDKLSCSSSTTAIPQGQLPQDMPSRRYDAPKPSRRRPEPSEQEIPHVPAR
HSSFEPRESGRKRRTTLTQSSSTSKRLLQSRSLRDRGAVRSRRREVEYPHSGAGRHRADEIEYPPAGADTEHGGSSMACEQ*





At3g30620 Link to TAIR Link to Aramemnon (431aa) 2 TMS, N-term is IN

hypothetical protein / predicted by genemark.hmm

MRNYSSESSMDQEYIVDEAESWSTRPEREEHAYKSFREEIERSAARRSQRRAEIARGKRAKSTERFMGNEVSLLRDFSPAGLL
EDVQHLFEKVSQNLSWIPMDEHRYQLLIKKLEELFGFPSGKGTKPKFDREELKDLWATIGNNVPLNSVRESTGTVSNIDMEMI
DSALTSILRRTKGKKVLRGDLNDASLVMLMLIHLCGYRMWTLTNGKKKVRGALCVGGVVTPILVACGVPLKEPRILEGRNIDF
KPALEDLYFEGSLPTKEITHTEGATTEEVDKTDETDEVEFDTRMYHFSEHVPPARESKSFSEAHKNNSKASSLRTCPRGDMTS
HSLVSKRFRMCLRGIHHSSLMNLGERGGPRSLDLAPGEEDFYNLEVYATTVLAAAEGERSGRLVNGLGAITGSIDDQLRSLFD
LGLSSKFSHTVDCVI*





At1g42360 Link to TAIR Link to Aramemnon (336aa) 2 TMS, N-term is OUT

hypothetical protein / predicted by genemark.hmm

MSNYSGSSSVDPDYNMDETESSSSKPEREQREYESFRRKAEIARGKKAMTERYELIDEDVEDEYMPEQTRRATKLLHKPDILP
TEEYVRLFKLNEFCSTRYPCSTSLAQLGLLEDVQHLYQSCHLDTLMAYPYVAYEDETIQFLFTLQVKLYQGMTSDELDCEGLG
FLRFSVHGHEYRLSIKRLEGLFGFPSGTGSKPKYEREDLWITIGSSVPLNASRSKSNQIRSPVIRYFQRSVANVLYSREITGT
VTNSDMEMIAMALKGTLRQTKNGMSLQGKVNNTPLSILLLIHLCGYKSWAVSNNRKRARGALCIGGVVTPILIACGVPLISAG
LEP*